APBB3

Protein-coding gene in the species Homo sapiens
APBB3
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2DYQ, 2YSC

Identifiers
AliasesAPBB3, FE65L2, SRA, amyloid beta precursor protein binding family B member 3
External IDsOMIM: 602711; MGI: 108404; HomoloGene: 21221; GeneCards: APBB3; OMA:APBB3 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for APBB3
Genomic location for APBB3
Band5q31.3Start140,558,268 bp[1]
End140,564,781 bp[1]
Gene location (Mouse)
Chromosome 18 (mouse)
Chr.Chromosome 18 (mouse)[2]
Chromosome 18 (mouse)
Genomic location for APBB3
Genomic location for APBB3
Band18|18 B2Start36,804,207 bp[2]
End36,812,419 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right hemisphere of cerebellum

  • left ovary

  • right ovary

  • right adrenal gland

  • right testis

  • right adrenal cortex

  • left adrenal cortex

  • left testis

  • right lobe of thyroid gland

  • pituitary gland
Top expressed in
  • neural layer of retina

  • superior frontal gyrus

  • primary visual cortex

  • facial motor nucleus

  • spermatocyte

  • muscle of thigh

  • dentate gyrus of hippocampal formation granule cell

  • cerebellar cortex

  • lumbar spinal ganglion

  • granulocyte
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • transcription factor binding
  • amyloid-beta binding
  • protein binding
Cellular component
  • nucleus
  • actin cytoskeleton
  • cytosol
  • cytoplasm
Biological process
  • regulation of transcription, DNA-templated
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10307

225372

Ensembl

ENSG00000113108

ENSMUSG00000117679

UniProt

O95704
Q96DX9

Q8R1C9

RefSeq (mRNA)
NM_133176
NM_006051
NM_133172
NM_133173
NM_133174

NM_133175

NM_146085
NM_001357512

RefSeq (protein)
NP_006042
NP_573418
NP_573419
NP_573420
NP_006042.3

NP_573418.2
NP_573419.2
NP_573420.2

NP_666197
NP_001344441

Location (UCSC)Chr 5: 140.56 – 140.56 MbChr 18: 36.8 – 36.81 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Amyloid beta A4 precursor protein-binding family B member 3 is a protein that in humans is encoded by the APBB3 gene.[5][6]

The protein encoded by this gene is a member of the APBB protein family. It is found in the cytoplasm and binds to the intracellular domain of the Alzheimer's disease beta-amyloid precursor protein (APP) as well as to other APP-like proteins. It is thought that the protein encoded by this gene may modulate the internalization of APP. Multiple transcript variants encoding several different isoforms have been found for this gene.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000113108 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000117679 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ermekova KS, Zambrano N, Linn H, Minopoli G, Gertler F, Russo T, Sudol M (Jan 1998). "The WW domain of neural protein FE65 interacts with proline-rich motifs in Mena, the mammalian homolog of Drosophila enabled". J Biol Chem. 272 (52): 32869–77. doi:10.1074/jbc.272.52.32869. PMID 9407065.
  6. ^ a b "Entrez Gene: APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3".

Further reading

  • Tanahashi H, Tabira T (1999). "Molecular cloning of human Fe65L2 and its interaction with the Alzheimer's beta-amyloid precursor protein". Neurosci. Lett. 261 (3): 143–6. doi:10.1016/S0304-3940(98)00995-1. PMID 10081969. S2CID 54307954.
  • Tanahashi H, Tabira T (1999). "Genome structure and chromosomal mapping of the gene for Fe65L2 interacting with Alzheimer's beta-amyloid precursor protein". Biochem. Biophys. Res. Commun. 258 (2): 385–9. doi:10.1006/bbrc.1999.0639. PMID 10329396.
  • Tanahashi H, Tabira T (2002). "Characterization of an amyloid precursor protein-binding protein Fe65L2 and its novel isoforms lacking phosphotyrosine-interaction domains". Biochem. J. 367 (Pt 3): 687–95. doi:10.1042/BJ20020562. PMC 1222940. PMID 12153398.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Chang Y, Tesco G, Jeong WJ, et al. (2004). "Generation of the beta-amyloid peptide and the amyloid precursor protein C-terminal fragment gamma are potentiated by FE65L1". J. Biol. Chem. 278 (51): 51100–7. doi:10.1074/jbc.M309561200. PMID 14527950.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.

External links


  • v
  • t
  • e