FAM120A

Protein-coding gene in the species Homo sapiens
FAM120A
Identifiers
AliasesFAM120A, C9orf10, DNAPTP1, DNAPTP5, OSSA, family with sequence similarity 120A, HBVPTPAP
External IDsOMIM: 612265; MGI: 2446163; HomoloGene: 8752; GeneCards: FAM120A; OMA:FAM120A - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)[1]
Chromosome 9 (human)
Genomic location for FAM120A
Genomic location for FAM120A
Band9q22.31Start93,451,685 bp[1]
End93,566,112 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for FAM120A
Genomic location for FAM120A
Band13|13 A5Start49,032,695 bp[2]
End49,121,493 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • tibia

  • mucosa of sigmoid colon

  • visceral pleura

  • parietal pleura

  • pylorus

  • palpebral conjunctiva

  • Epithelium of choroid plexus

  • bronchial epithelial cell

  • germinal epithelium

  • gingival epithelium
Top expressed in
  • ciliary body

  • retinal pigment epithelium

  • migratory enteric neural crest cell

  • endothelial cell of lymphatic vessel

  • ureter

  • crypt of lieberkuhn of small intestine

  • decidua

  • conjunctival fornix

  • vas deferens

  • iris
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

23196

218236

Ensembl

ENSG00000048828

ENSMUSG00000038014

UniProt

Q9NZB2

Q6A0A9

RefSeq (mRNA)

NM_001286722
NM_001286723
NM_001286724
NM_014612

NM_001033268

RefSeq (protein)

NP_001273651
NP_001273652
NP_001273653
NP_055427

NP_001028440

Location (UCSC)Chr 9: 93.45 – 93.57 MbChr 13: 49.03 – 49.12 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Constitutive coactivator of PPAR-gamma-like protein 1 is a protein that in humans is encoded by the FAM120A gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000048828 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000038014 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Holden S, Raymond FL (Oct 2003). "The human gene CXorf17 encodes a member of a novel family of putative transmembrane proteins: cDNA cloning and characterization of CXorf17 and its mouse ortholog orf34". Gene. 318: 149–61. doi:10.1016/S0378-1119(03)00770-4. PMID 14585507.
  6. ^ "Entrez Gene: FAM120A family with sequence similarity 120A".

Further reading

  • Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  • Nagase T, Seki N, Ishikawa K, et al. (1996). "Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1". DNA Res. 3 (1): 17–24. doi:10.1093/dnares/3.1.17. PMID 8724849.
  • Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
  • Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Humphray SJ, Oliver K, Hunt AR, et al. (2004). "DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369–74. Bibcode:2004Natur.429..369H. doi:10.1038/nature02465. PMC 2734081. PMID 15164053.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Rush J, Moritz A, Lee KA, et al. (2005). "Immunoaffinity profiling of tyrosine phosphorylation in cancer cells". Nat. Biotechnol. 23 (1): 94–101. doi:10.1038/nbt1046. PMID 15592455. S2CID 7200157.
  • Ong SE, Mittler G, Mann M (2005). "Identifying and quantifying in vivo methylation sites by heavy methyl SILAC". Nat. Methods. 1 (2): 119–26. doi:10.1038/nmeth715. PMID 15782174. S2CID 6654604.
  • Beausoleil SA, Villén J, Gerber SA, et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID 16964243. S2CID 14294292.
  • Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.


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