NFKBIL1

Protein-coding gene in the species Homo sapiens
NFKBIL1
Identifiers
AliasesNFKBIL1, IKBL, LST1, NFKBIL, NFKB inhibitor like 1
External IDsOMIM: 601022; MGI: 1340031; HomoloGene: 3671; GeneCards: NFKBIL1; OMA:NFKBIL1 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for NFKBIL1
Genomic location for NFKBIL1
Band6p21.33Start31,546,870 bp[1]
End31,558,829 bp[1]
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)[2]
Chromosome 17 (mouse)
Genomic location for NFKBIL1
Genomic location for NFKBIL1
Band17 B1|17 18.6 cMStart35,439,151 bp[2]
End35,454,768 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • body of pancreas

  • body of stomach

  • fundus

  • apex of heart

  • left ovary

  • gastric mucosa

  • right ovary

  • muscle layer of sigmoid colon

  • gastrocnemius muscle
Top expressed in
  • granulocyte

  • muscle of thigh

  • internal carotid artery

  • spermatid

  • external carotid artery

  • ventricular zone

  • seminiferous tubule

  • fossa

  • spermatocyte

  • epiblast
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
Cellular component
  • cytosol
  • nucleus
Biological process
  • cytoplasmic sequestering of transcription factor
  • negative regulation of tumor necrosis factor production
  • negative regulation of toll-like receptor signaling pathway
  • I-kappaB kinase/NF-kappaB signaling
  • negative regulation of NF-kappaB transcription factor activity
  • cellular response to lipopolysaccharide
  • negative regulation of lipopolysaccharide-mediated signaling pathway
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4795

18038

Ensembl
ENSG00000206440
ENSG00000234530
ENSG00000236346
ENSG00000235125
ENSG00000236196

ENSG00000204498
ENSG00000227565

ENSMUSG00000042419

UniProt

Q9UBC1

O88995

RefSeq (mRNA)

NM_005007
NM_001144961
NM_001144962
NM_001144963

NM_010909
NM_001364909

RefSeq (protein)

NP_001138433
NP_001138434
NP_001138435
NP_004998

NP_035039
NP_001351838

Location (UCSC)Chr 6: 31.55 – 31.56 MbChr 17: 35.44 – 35.45 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

NF-kappa-B inhibitor-like protein 1 is a protein that in humans is encoded by the NFKBIL1 gene.[5][6]

Function

This gene encodes a divergent member of the I-kappa-B family of proteins. Its function is unclear. The gene lies within the major histocompatibility complex (MHC) class I region on chromosome 6.[6]

References

  1. ^ a b c ENSG00000234530, ENSG00000236346, ENSG00000235125, ENSG00000236196, ENSG00000204498, ENSG00000227565 GRCh38: Ensembl release 89: ENSG00000206440, ENSG00000234530, ENSG00000236346, ENSG00000235125, ENSG00000236196, ENSG00000204498, ENSG00000227565 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000042419 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Albertella MR, Campbell RD (May 1994). "Characterization of a novel gene in the human major histocompatibility complex that encodes a potential new member of the I kappa B family of proteins". Human Molecular Genetics. 3 (5): 793–9. doi:10.1093/hmg/3.5.793. PMID 8081366.
  6. ^ a b "Entrez Gene: NFKBIL1 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1".

Further reading

  • Iris FJ, Bougueleret L, Prieur S, Caterina D, Primas G, Perrot V, Jurka J, Rodriguez-Tome P, Claverie JM, Dausset J (Feb 1993). "Dense Alu clustering and a potential new member of the NF kappa B family within a 90 kilobase HLA class III segment". Nature Genetics. 3 (2): 137–45. doi:10.1038/ng0293-137. PMID 8499947. S2CID 33041319.
  • Shiina T, Tamiya G, Oka A, Yamagata T, Yamagata N, Kikkawa E, Goto K, Mizuki N, Watanabe K, Fukuzumi Y, Taguchi S, Sugawara C, Ono A, Chen L, Yamazaki M, Tashiro H, Ando A, Ikemura T, Kimura M, Inoko H (Feb 1998). "Nucleotide sequencing analysis of the 146-kilobase segment around the IkBL and MICA genes at the centromeric end of the HLA class I region". Genomics. 47 (3): 372–82. doi:10.1006/geno.1997.5114. PMID 9480751.
  • Neville MJ, Campbell RD (Apr 1999). "A new member of the Ig superfamily and a V-ATPase G subunit are among the predicted products of novel genes close to the TNF locus in the human MHC". Journal of Immunology. 162 (8): 4745–54. doi:10.4049/jimmunol.162.8.4745. PMID 10202016.
  • Allcock RJ, Christiansen FT, Price P (Jul 1999). "The central MHC gene IKBL carries a structural polymorphism that is associated with HLA-A3,B7,DR15". Immunogenetics. 49 (7–8): 660–5. doi:10.1007/s002510050662. PMID 10369924. S2CID 32440895.
  • Okamoto K, Makino S, Yoshikawa Y, Takaki A, Nagatsuka Y, Ota M, Tamiya G, Kimura A, Bahram S, Inoko H (Feb 2003). "Identification of I kappa BL as the second major histocompatibility complex-linked susceptibility locus for rheumatoid arthritis". American Journal of Human Genetics. 72 (2): 303–12. doi:10.1086/346067. PMC 379224. PMID 12509789.
  • Lin CH, Cho CL, Tsai WC, Ou TT, Wu CC, Yen JH, Liu HW (Jun 2006). "Inhibitors of kB-like gene polymorphisms in rheumatoid arthritis". Immunology Letters. 105 (2): 193–7. doi:10.1016/j.imlet.2006.03.003. PMID 16644022.
  • Glas J, Török HP, Tonenchi L, Müller-Myhsok B, Mussack T, Wetzke M, Klein W, Epplen JT, Griga T, Schiemann U, Lohse P, Seiderer J, Schnitzler F, Brand S, Ochsenkühn T, Folwaczny M, Folwaczny C (Jul 2006). "Role of the NFKB1 -94ins/delATTG promoter polymorphism in IBD and potential interactions with polymorphisms in the CARD15/NOD2, IKBL, and IL-1RN genes". Inflammatory Bowel Diseases. 12 (7): 606–11. doi:10.1097/01.ibd.0000225346.23765.6b. PMID 16804398. S2CID 25535173.
  • Koch W, Hoppmann P, Michou E, Jung V, Pfeufer A, Mueller JC, Gieger C, Wichmann HE, Meitinger T, Schömig A, Kastrati A (Aug 2007). "Association of variants in the BAT1-NFKBIL1-LTA genomic region with protection against myocardial infarction in Europeans". Human Molecular Genetics. 16 (15): 1821–7. doi:10.1093/hmg/ddm130. PMID 17517687.
  • Ramasawmy R, Faé KC, Cunha-Neto E, Borba SC, Ianni B, Mady C, Goldberg AC, Kalil J (Jan 2008). "Variants in the promoter region of IKBL/NFKBIL1 gene may mark susceptibility to the development of chronic Chagas' cardiomyopathy among Trypanosoma cruzi-infected individuals". Molecular Immunology. 45 (1): 283–8. doi:10.1016/j.molimm.2007.04.015. PMID 17544510.
  • Kariz S, Milutinović A, Bregar D, Terzić I, Terzić R, Lovrecić L, Herova M, Hruskovicova H, Peterlin B, Petrovic D, Zorc-Pleskovic R (Jun 2007). "The interleukin-1 receptor antagonist gene and the inhibitor of kappa B-like protein gene polymorphisms are not associated with myocardial infarction in Slovene population with type 2 diabetes". Collegium Antropologicum. 31 (2): 503–7. PMID 17847930.


  • v
  • t
  • e