PYGO1

Protein-coding gene in the species Homo sapiens
PYGO1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2VP7, 2VPB, 2VPD, 2VPE, 2VPG

Identifiers
AliasesPYGO1, pygopus family PHD finger 1
External IDsOMIM: 606902; MGI: 1919385; HomoloGene: 41050; GeneCards: PYGO1; OMA:PYGO1 - orthologs
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[1]
Chromosome 9 (mouse)
Genomic location for PYGO1
Genomic location for PYGO1
Band9|9 DStart72,832,927 bp[1]
End72,859,463 bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • gastrocnemius muscle

  • biceps brachii

  • Achilles tendon

  • stromal cell of endometrium

  • smooth muscle tissue

  • cerebellar cortex

  • cerebellar hemisphere

  • quadriceps femoris muscle

  • vastus lateralis muscle
Top expressed in
  • dentate gyrus of hippocampal formation granule cell

  • genital tubercle

  • lumbar subsegment of spinal cord

  • olfactory epithelium

  • muscle of thigh

  • ventricular zone

  • urethra

  • male urethra

  • zygote

  • primary visual cortex
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • metal ion binding
  • methylated histone binding
Cellular component
  • nucleus
  • nucleoplasm
Biological process
  • protein localization to nucleus
  • spermatid nucleus differentiation
  • post-embryonic development
  • Wnt signaling pathway
  • hematopoietic progenitor cell differentiation
  • positive regulation of transcription by RNA polymerase II
  • kidney development
  • spermatid development
  • beta-catenin-TCF complex assembly
  • canonical Wnt signaling pathway
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

26108

72135

Ensembl

n/a

ENSMUSG00000034910

UniProt

Q9Y3Y4

Q9D0P5

RefSeq (mRNA)

NM_015617
NM_001330326
NM_001367806

NM_028116

RefSeq (protein)

NP_001317255
NP_056432
NP_001354735

NP_082392

Location (UCSC)n/aChr 9: 72.83 – 72.86 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Pygopus homolog 1 (Drosophila) is a protein in humans that is encoded by the PYGO1 gene.[4]

References

  1. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000034910 – Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Entrez Gene: Pygopus homolog 1 (Drosophila)". Retrieved 2012-12-23.

External links

  • PDBe-KB provides an overview of all the structure information available in the PDB for Human Pygopus homolog 1


Further reading


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