ZCCHC17

Protein-coding gene in the species Homo sapiens
ZCCHC17
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2CQO

Identifiers
AliasesZCCHC17, HSPC251, PS1D, pNO40, zinc finger CCHC-type containing 17
External IDsMGI: 1919955; HomoloGene: 32319; GeneCards: ZCCHC17; OMA:ZCCHC17 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for ZCCHC17
Genomic location for ZCCHC17
Band1p35.2Start31,296,982 bp[1]
End31,364,953 bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • C1 segment

  • hypothalamus

  • amygdala

  • cingulate gyrus

  • anterior cingulate cortex

  • prefrontal cortex

  • right frontal lobe

  • substantia nigra

  • Brodmann area 9

  • middle temporal gyrus
    n/a
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • zinc ion binding
  • protein binding
  • metal ion binding
  • nucleic acid binding
  • RNA binding
Cellular component
  • nucleolus
  • nucleus
Biological process
  • xenophagy
  • positive regulation of defense response to virus by host
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51538

619605

Ensembl

ENSG00000121766

ENSMUSG00000028772

UniProt

Q9NP64

Q9ESX4

RefSeq (mRNA)
NM_001282566
NM_001282567
NM_001282568
NM_001282569
NM_001282570

NM_001282571
NM_001282572
NM_001282573
NM_001282574
NM_016505

NM_153160

RefSeq (protein)
NP_001269495
NP_001269496
NP_001269497
NP_001269498
NP_001269499

NP_001269500
NP_001269501
NP_001269502
NP_001269503
NP_057589

NP_694800
NP_001342327
NP_001342328
NP_001342329

Location (UCSC)Chr 1: 31.3 – 31.36 Mbn/a
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Nucleolar protein of 40 kDa is a protein that in humans is encoded by the ZCCHC17 gene.[4][5][6]

See also

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000121766 – Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ Gueydan C, Wauquier C, De Mees C, Huez G, Kruys V (Nov 2002). "Identification of ribosomal proteins specific to higher eukaryotic organisms". J Biol Chem. 277 (47): 45034–40. doi:10.1074/jbc.M208551200. PMID 12202495.
  5. ^ Chang WL, Lee DC, Leu S, Huang YM, Lu MC, Ouyang P (Aug 2003). "Molecular characterization of a novel nucleolar protein, pNO40". Biochem Biophys Res Commun. 307 (3): 569–77. doi:10.1016/S0006-291X(03)01208-7. PMID 12893261.
  6. ^ "Entrez Gene: ZCCHC17 zinc finger, CCHC domain containing 17".

Further reading

  • Gregory SG, Barlow KF, McLay KE, et al. (2006). "The DNA sequence and biological annotation of human chromosome 1". Nature. 441 (7091): 315–21. Bibcode:2006Natur.441..315G. doi:10.1038/nature04727. PMID 16710414.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Zhang QH, Ye M, Wu XY, et al. (2001). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152.
  • v
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  • 2cqo: Solution structure of the S1 RNA binding domain of human hypothetical protein FLJ11067
    2cqo: Solution structure of the S1 RNA binding domain of human hypothetical protein FLJ11067


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