PITX3

Protein-coding gene
PITX3
Identifiers
AliasesPITX3, ASMD, ASOD, CTPP4, CTRCT11, PTX3, paired like homeodomain 3, ASGD1
External IDsOMIM: 602669 MGI: 1100498 HomoloGene: 3689 GeneCards: PITX3
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)[1]
Chromosome 19 (mouse)
Genomic location for PITX3
Genomic location for PITX3
Band19 C3|19 38.75 cMStart46,124,124 bp[1]
End46,136,765 bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • skeletal muscle tissue

  • ventricle

  • left ventricle

  • mesencephalon

  • substantia nigra

  • face

  • sensory nervous system

  • sensory organ

  • kidney
Top expressed in
  • lens

  • lip

  • female urethra

  • male urethra

  • temporal muscle

  • internal carotid artery

  • tongue

  • vastus lateralis muscle

  • striated muscle tissue

  • triceps brachii muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • RNA polymerase II cis-regulatory region sequence-specific DNA binding
  • DNA-binding transcription factor activity
  • DNA binding
  • sequence-specific DNA binding
  • DNA-binding transcription activator activity, RNA polymerase II-specific
  • DNA-binding transcription factor activity, RNA polymerase II-specific
Cellular component
  • nucleus
  • neuronal cell body
Biological process
  • animal organ morphogenesis
  • positive regulation of transcription, DNA-templated
  • multicellular organism development
  • dopaminergic neuron differentiation
  • regulation of gene expression
  • neuron development
  • lens development in camera-type eye
  • regulation of transcription, DNA-templated
  • lens fiber cell differentiation
  • lens morphogenesis in camera-type eye
  • transcription by RNA polymerase II
  • locomotory behavior
  • midbrain development
  • positive regulation of transcription by RNA polymerase II
  • transcription, DNA-templated
  • human ageing
  • negative regulation of gliogenesis
  • response to immobilization stress
  • response to cocaine
  • response to morphine
  • positive regulation of neuron apoptotic process
  • negative regulation of neurogenesis
  • response to methamphetamine hydrochloride
  • positive regulation of cell proliferation in midbrain
  • cellular response to glial cell derived neurotrophic factor
  • anatomical structure morphogenesis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5309

18742

Ensembl

n/a

ENSMUSG00000025229

UniProt

O75364

O35160

RefSeq (mRNA)

NM_005029

NM_008852

RefSeq (protein)

NP_005020

NP_032878

Location (UCSC)n/aChr 19: 46.12 – 46.14 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Pituitary homeobox 3 is a protein that in humans is encoded by the PITX3 gene.[4][5]

Function

This gene encodes a member of the RIEG/PITX homeobox family, which is in the bicoid class of homeodomain proteins. Members of this family act as transcription factors. This protein is involved in lens formation during eye development,[5] and the specification and terminal differentiation of mesencephalic dopamine neurons in the substantia nigra compacta that are lost in Parkinson's disease.[6]

Clinical significance

Mutations of this gene have been associated with anterior segment mesenchymal dysgenesis (ASMD) and congenital cataracts.[5]

References

  1. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000025229 – Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ Semina EV, Ferrell RE, Mintz-Hittner HA, Bitoun P, Alward WL, Reiter RS, Funkhauser C, Daack-Hirsch S, Murray JC (June 1998). "A novel homeobox gene PITX3 is mutated in families with autosomal-dominant cataracts and ASMD". Nature Genetics. 19 (2): 167–70. doi:10.1038/527. PMID 9620774. S2CID 23213513.
  5. ^ a b c "Entrez Gene: PITX3 paired-like homeodomain transcription factor 3".
  6. ^ Smidt MP, Smits SM, Bouwmeester H, Hamers FP, van der Linden AJ, Hellemons AJ, Graw J, Burbach JP (March 2004). "Early developmental failure of substantia nigra dopamine neurons in mice lacking the homeodomain gene Pitx3". Development. 131 (5): 1145–55. doi:10.1242/dev.01022. PMID 14973278. S2CID 20585228.

Further reading

  • Smits SM, Smidt MP (2006). "The role of Pitx3 in survival of midbrain dopaminergic neurons". Parkinson's Disease and Related Disorders. Journal of Neural Transmission. Supplementa. Vol. 70. pp. 57–60. doi:10.1007/978-3-211-45295-0_10. ISBN 978-3-211-28927-3. PMID 17017509. {{cite book}}: |journal= ignored (help)
  • Hittner HM, Kretzer FL, Antoszyk JH, Ferrell RE, Mehta RS (January 1982). "Variable expressivity of autosomal dominant anterior segment mesenchymal dysgenesis in six generations". American Journal of Ophthalmology. 93 (1): 57–70. doi:10.1016/0002-9394(82)90700-0. PMID 6801987.
  • Berry V, Yang Z, Addison PK, Francis PJ, Ionides A, Karan G, Jiang L, Lin W, Hu J, Yang R, Moore A, Zhang K, Bhattacharya SS (August 2004). "Recurrent 17 bp duplication in PITX3 is primarily associated with posterior polar cataract (CPP4)". Journal of Medical Genetics. 41 (8): e109. doi:10.1136/jmg.2004.020289. PMC 1735853. PMID 15286169.
  • Finzi S, Li Y, Mitchell TN, Farr A, Maumenee IH, Sallum JM, Sundin O (September 2005). "Posterior polar cataract: genetic analysis of a large family". Ophthalmic Genetics. 26 (3): 125–30. doi:10.1080/13816810500229124. PMID 16272057. S2CID 9519631.
  • Martinat C, Bacci JJ, Leete T, Kim J, Vanti WB, Newman AH, Cha JH, Gether U, Wang H, Abeliovich A (February 2006). "Cooperative transcription activation by Nurr1 and Pitx3 induces embryonic stem cell maturation to the midbrain dopamine neuron phenotype". Proceedings of the National Academy of Sciences of the United States of America. 103 (8): 2874–9. Bibcode:2006PNAS..103.2874M. doi:10.1073/pnas.0511153103. PMC 1413837. PMID 16477036.
  • Bidinost C, Matsumoto M, Chung D, Salem N, Zhang K, Stockton DW, Khoury A, Megarbane A, Bejjani BA, Traboulsi EI (April 2006). "Heterozygous and homozygous mutations in PITX3 in a large Lebanese family with posterior polar cataracts and neurodevelopmental abnormalities". Investigative Ophthalmology & Visual Science. 47 (4): 1274–80. doi:10.1167/iovs.05-1095. PMID 16565358.
  • Burdon KP, McKay JD, Wirth MG, Russell-Eggit IM, Bhatti S, Ruddle JB, Dimasi D, Mackey DA, Craig JE (2006). "The PITX3 gene in posterior polar congenital cataract in Australia". Molecular Vision. 12: 367–71. PMID 16636655.
  • Sakazume S, Sorokina E, Iwamoto Y, Semina EV (2007). "Functional analysis of human mutations in homeodomain transcription factor PITX3". BMC Molecular Biology. 8: 84. doi:10.1186/1471-2199-8-84. PMC 2093940. PMID 17888164.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

  • v
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  • 1yz8: Solution structure of the k50 class homeodomain pitx2 bound to dna and implications for mutations that cause rieger syndrome
    1yz8: Solution structure of the k50 class homeodomain pitx2 bound to dna and implications for mutations that cause rieger syndrome
  • v
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(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies


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